BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039H02SP1|AL430763
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1722 653 0.0
3x_Contig1422 359 4e-99
3x_Contig1384 345 7e-95
3x_Contig1717 152 1e-36
3x_Contig869 148 2e-35
3x_Contig1799 136 9e-32
3x_Contig1651 128 2e-29
3x_Contig278 128 2e-29
>3x_Contig1722
Length = 17718
Score = 653 bits (327), Expect = 0.0
Identities = 416/445 (93%), Gaps = 7/445 (1%)
Strand = Plus / Minus
Query: 375 tgtcgtaagatagactgaagacaagccagacgagaggtcatgtgagctagccagcacacg 434
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2177 tgtcgtaagatagacttaagacaagccagacgagaggtcatgtgagctagccagcacacg 2118
Query: 435 acagagttccaagacgtcagtgactgtgcatatggmtcctgtggtatccagaggggatgg 494
||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 2117 gcagagttccaagacgtcagtgactgggcatatggatcctgtggtatccaga-gggatga 2059
Query: 495 cctagatggatcatagacggccacgtgatggtcttgagtgcgcgtggaggacagtagctg 554
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 2058 cctagatggatcatagacggtcacgtgatggtcttgagtgcgcgtggaggacggtagctg 1999
Query: 555 cacaggacctacaagggcatggmggcaatrarttgccatgacgaag-ctgacgaccatgc 613
|||| |||||||||||||||| |||||| | |||||||||||||| ||||||||||| |
Sbjct: 1998 cacaaaacctacaagggcatggaggcaatgagttgccatgacgaagtctgacgaccatcc 1939
Query: 614 gagtatatmastcgagtataaaaggctgagctatgttgcgacctcttggggaggttggat 673
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1938 gagtatataagtcgagtataaaaggctgagctatgttgcgacctcttggggaggttggat 1879
Query: 674 gcaacaagagaaagaagaagcaaggacgcatatactcaacgatctagctaaatagattat 733
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1878 gcaacaagagaaagaag-agcaaggacgcatatactcaacgatctagctaaatag---at 1823
Query: 734 tatattatmmtcgttgtattgtttgatatcaacgatccctcatcaggcgatt-awcaatc 792
|||||||| ||||| |||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 1822 tatattatattcgttatattgtttgatatcaacgatccctcatcaggcgattaatcaatc 1763
Query: 793 acatatcatccaaagcatatcacaa 817
| ||||||||||| ||||||||||
Sbjct: 1762 aactatcatccaaaccatatcacaa 1738
>3x_Contig1422
Length = 9570
Score = 359 bits (180), Expect = 4e-99
Identities = 244/266 (91%)
Strand = Plus / Plus
Query: 1 ccaacctatcttttcgtccatcagcacatacaaatttcattgagcataaatttatgtagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9233 ccaacctatcttttcgtccatcagcacatacaaatttcattgagcataaatttatgtagg 9292
Query: 61 aaatgagatataatgcaggatatgttccttaatattcccaatttccgatgcacgtacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||
Sbjct: 9293 aaatgagatataatgcaggatatgttccttaatattcccaatttccgatgcccgtcccca 9352
Query: 121 ttttagttggagtttctggaataattcgtgaggtaccgaagcaaaacaatgagaagcttt 180
||| |||| |||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 9353 tttcccttggcgtttctggcatcccccgtgaggtaccgaagcaaaacaatgagaagcttt 9412
Query: 181 tgttcatggacaaatgaataaagttttgtccttaacagtcacgcaagasagttatgtcgc 240
||||||||||||||||| ||||||||| ||||||||||||| | |||| ||| | |||||
Sbjct: 9413 tgttcatggacaaatgactaaagttttatccttaacagtcaagaaagagagtaaagtcgc 9472
Query: 241 cgtaacgtaggttttttggagcttaa 266
| ||||||||||||||| ||| ||||
Sbjct: 9473 cataacgtaggttttttagagattaa 9498
>3x_Contig1384
Length = 9372
Score = 345 bits (173), Expect = 7e-95
Identities = 232/253 (91%), Gaps = 5/253 (1%)
Strand = Plus / Plus
Query: 566 caagggcatggmggcaatrarttgccatgacgaagctgacgaccatgcgagtatatmast 625
||||||||||| |||||| | ||||||||||||| ||||||||||| ||||||||| | |
Sbjct: 1 caagggcatggaggcaatgagttgccatgacgaatctgacgaccatccgagtatataagt 60
Query: 626 cgagtataaaaggctgagctatgttgcgacctcttggggaggttggatgcaacaagagaa 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgagtataaaaggctgagctatgttgcgacctcttggggaggttggatgcaacaagagaa 120
Query: 686 agaagaagcaaggacgcatatactcaacgatctagctaaatagattattatattatmmtc 745
|| || ||||||||||||||||||||||||||||||||||||| ||| |||||| ||
Sbjct: 121 agcag-agcaaggacgcatatactcaacgatctagctaaatag---attttattatattc 176
Query: 746 gttgtattgtttgatatcaacgatccctcatcaggcgatt-awcaatcacatatcatcca 804
||| |||||||||||||||||||||||||||||||||||| | |||||| |||||||||
Sbjct: 177 gttatattgtttgatatcaacgatccctcatcaggcgattaatcaatcaactatcatcca 236
Query: 805 aagcatatcacaa 817
|| ||||||||||
Sbjct: 237 aaccatatcacaa 249
>3x_Contig1717
Length = 18389
Score = 152 bits (76), Expect = 1e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 832 tggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaat 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1695 tggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaat 1754
Query: 892 ccgggtacgacctact 907
||||||||||||||||
Sbjct: 1755 ccgggtacgacctact 1770
>3x_Contig869
Length = 2873
Score = 148 bits (74), Expect = 2e-35
Identities = 74/74 (100%)
Strand = Plus / Minus
Query: 833 ggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaatc 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 ggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaatc 1017
Query: 893 cgggtacgacctac 906
||||||||||||||
Sbjct: 1016 cgggtacgacctac 1003
>3x_Contig1799
Length = 39855
Score = 136 bits (68), Expect = 9e-32
Identities = 102/114 (89%)
Strand = Plus / Plus
Query: 409 aggtcatgtgagctagccagcacacgacagagttccaagacgtcagtgactgtgcatatg 468
||||||||||||||| ||| | | || ||||||||||||||||||||||||| |||||||
Sbjct: 29648 aggtcatgtgagctatccaacgctcggcagagttccaagacgtcagtgactgggcatatg 29707
Query: 469 gmtcctgtggtatccagaggggatggcctagatggatcatagacggccacgtga 522
| |||||||||||||||| |||| ||||||||||||||| ||| || |||||||
Sbjct: 29708 gatcctgtggtatccagaagggaaggcctagatggatcaaagagggtcacgtga 29761
>3x_Contig1651
Length = 13087
Score = 128 bits (64), Expect = 2e-29
Identities = 70/72 (97%)
Strand = Plus / Minus
Query: 833 ggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaatc 892
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13036 ggttctatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaatc 12977
Query: 893 cgggtacgacct 904
|||||| |||||
Sbjct: 12976 cgggtaggacct 12965
>3x_Contig278
Length = 1114
Score = 128 bits (64), Expect = 2e-29
Identities = 73/76 (96%)
Strand = Plus / Minus
Query: 832 tggttgtatagtgtagtggttatcactttcggttttgatccgaacaaccccggttcgaat 891
|||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 tggttgtataatgtaaaggttatcactttcggttttgatccgaacaaccccggttcgaat 1006
Query: 892 ccgggtacgacctact 907
||||||||||||||||
Sbjct: 1005 ccgggtacgacctact 990
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5207
Number of Sequences: 1807
Number of extensions: 5207
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 8
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)